Proteins
  2. Proteins (PIs)
  3. Proteins details
PINIR_181 [R0GJB3]  : Uncharacterized protein

80Length

Capsella rubellaSpecie

CARUB_v10021230mgGene Name

8401Mass

1Domain Count

Sequence :
     FASTA
MATNKILVMS LIIVGAMLGG VIPGVTTGKT AKACPLYCLQ VEYMTCLSSG DAKLPPRCNC CLAPKNCTLH 70
LSDSTSIHCK 80
SIGNAL PEPTIDE
SEQUENCE Position
DOMAINS ARCHITECTURE  
Domain Position Length Architecture
IRD-312
32 - 80 49
ISO - ELECTRIC POINT
Iso Eelectric Point charge at pH 7.4 charge at pH 5.5 charge at pH 8.0
7.688
5.2 0.6 -2.4
CROSS REFERENCES
Uniprot Interpro Id Pfam Id EMBL
R0GJB3 View PI in InterPro
IPR003465 		View protein in Pfam
PF02428		 KB870806
REFERENCES
PubMed ID:     23749190    |
Application:
REACTIVE LOOPS
Entry RCL Sequence Target Protease Position
RL-27 CPLYC Chymotrypsin 35 - 39
GO TERMS
Molecular Function Cellular Component Biological Process
serine-type endopeptidase inhibitor activity (GO:0004867) integral component of membrane (GO:0016021) None
SPATIO TEMPORAL DISTRIBUTION
Tissue Distribution Induction Elicitor Molecules Target Insect Remarks Reference
Genome assembly 23749190
BIO-CHEMICAL PROPERTIES
Ki (uM) IC50 (uM) Target Protease Cross Reactivity Remarks Reference
No Records Found
BIO-PHYSICAL PROPERTIES
Affinity Binding Energy Stability Remarks Reference
No Records Found
DOMAIN STRUCTURE FOLD
Beta Sheet Numbers Alpha Helix Numbers Coil Numbers Disulphide Bonds Numbers Remarks Reference
No Records Found
Entry Domain Position RCL RCL Position Linker Linker Position Domain Type
IRD-312 32 - 80 CPLYC 34 - 38 - H+L Type (Type-III)
KACPLYCLQVEYMTCLSSGDAKLPPRCNCCLAPKNCTLHLSDSTSIHCK
CPLYC
H+L Type (Type-III)
3,27 ; 7,30 ; 15,36 ; 29,48
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49
K A C P L Y C L Q V E Y M T C L S S G D A K L P P R C N C C L A P K N C T L H L S D S T S I H C K


DOMAINS ARCHITECTURE
Domain Position Length Architecture
IRD-312
 32 - 80 49
Amino Acid Count % by Frequency
Alanine 6 7.5
Cysteine 8 10
Aspartic acid 2 2.5
Glutamic acid 1 1.25
Phenylalanine 0 0
Glycine 6 7.5
Histidine 2 2.5
Isoleucine 5 6.25
Lysine 6 7.5
Leucine 10 12.5
Methionine 4 5
Asparagine 3 3.75
Proline 5 6.25
Glutamine 1 1.25
Arginine 1 1.25
Serine 6 7.5
Threonine 7 8.75
Valine 5 6.25
Tryptophan 0 0
Tyrosine 2 2.5