Proteins
  2. Proteins (PIs)
  3. Proteins details
PINIR_2 [P84813]  : Potamin-1 (PT-1) (Fragment)

47Length

Solanum tuberosumSpecie

-Gene Name

4833Mass

1Domain Count

Sequence :
     FASTA
DICTNCCAGT KGCNTTSANG AFICEGQSDP KKPKACPLNC DPHIAYA 47
SIGNAL PEPTIDE
SEQUENCE Position
DOMAINS ARCHITECTURE  
Domain Position Length Architecture
IRD-54
1 - 47 47
ISO - ELECTRIC POINT
Iso Eelectric Point charge at pH 7.4 charge at pH 5.5 charge at pH 8.0
6.2
0.7 -3 -5.5
CROSS REFERENCES
Uniprot Interpro Id Pfam Id EMBL
P84813 View PI in InterPro
IPR003465 		View protein in Pfam
PF02428
REFERENCES
PubMed ID:     15809084    |
Application:
REACTIVE LOOPS
Entry RCL Sequence Target Protease Position
RL-2 CPLNC Chymotrypsin 37 - 41
GO TERMS
Molecular Function Cellular Component Biological Process
serine-type endopeptidase inhibitor activity (GO:0004867) None defense response to fungus (GO:0050832) defense response to Gram-positive bacterium (GO:0050830) killing of cells of other organism (GO:0031640)
SPATIO TEMPORAL DISTRIBUTION
Tissue Distribution Induction Elicitor Molecules Target Insect Remarks Reference
Antimicrobial activity against Candida albicans, Rhizoctonia solani, and Clavibacter michiganense subsp. michiganinse. 15809084
BIO-CHEMICAL PROPERTIES
Ki (uM) IC50 (uM) Target Protease Cross Reactivity Remarks Reference
trypsin, chymotrypsin, papain trypsin, papain 15809084
BIO-PHYSICAL PROPERTIES
Affinity Binding Energy Stability Remarks Reference
No Records Found
DOMAIN STRUCTURE FOLD
Beta Sheet Numbers Alpha Helix Numbers Coil Numbers Disulphide Bonds Numbers Remarks Reference
No Records Found
Entry Domain Position RCL RCL Position Linker Linker Position Domain Type
IRD-54 1 - 47 CPLNC 36 - 40 DPKKP 29 - 33 H-L Type (Type-I)
DICTNCCAGTKGCNTTSANGAFICEGQSDPKKPKACPLNCDPHIAYA
CPLNC
DPKKP
H-L Type (Type-I)
3,24 ; 7,13 ; 36,40
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47
D I C T N C C A G T K G C N T T S A N G A F I C E G Q S D P K K P K A C P L N C D P H I A Y A


DOMAINS ARCHITECTURE
Domain Position Length Architecture
IRD-54
 1 - 47 47
Amino Acid Count % by Frequency
Alanine 6 12.77
Cysteine 7 14.89
Aspartic acid 3 6.38
Glutamic acid 1 2.13
Phenylalanine 1 2.13
Glycine 4 8.51
Histidine 1 2.13
Isoleucine 3 6.38
Lysine 4 8.51
Leucine 1 2.13
Methionine 0 0
Asparagine 4 8.51
Proline 4 8.51
Glutamine 1 2.13
Arginine 0 0
Serine 2 4.26
Threonine 4 8.51
Valine 0 0
Tryptophan 0 0
Tyrosine 1 2.13