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Reactive Loops (RCL)
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Proteins
Proteins (PIs)
Proteins details
PINIR_38
[
C5XFQ3
] :
Uncharacterized protein
77
Length
Sorghum bicolor
Specie
SORBI_3003G111300
Gene Name
8058
Mass
1
Domain Count
Overview
Function
Domains
Amino acid (aa) Composition
Visualization
Sequence :
FASTA Sequence copied to clipboard!
×
FASTA
MAASRFYVTC
ALLLIGVVLL
GQQGIEGAVA
CPQYCLEVDY
VTCPSSGSEK
LPARCNCCLA
PKGCTLHLSD
70
GTQQTCS
77
SIGNAL PEPTIDE
SEQUENCE
Position
MAASRFYVTCALLLIGVVLLGQQGIEG
1 ↔ 27
DISULPHIDE BOND
Disulfidebondtype
Position
Disulfide bond 1
3 ↔ 27
Disulfide bond 2
7 ↔ 15
Disulfide bond 3
29 ↔ 48
Disulfide bond 4
30 ↔ 36
DOMAINS ARCHITECTURE
View diagram
Domain
Position
Length
Architecture
IRD-396
29 - 77
49
ISO - ELECTRIC POINT
Iso Eelectric Point
charge at pH 7.4
charge at pH 5.5
charge at pH 8.0
5.183
-0.2
-4.7
-7.9
CROSS REFERENCES
Uniprot
Interpro Id
Pfam Id
EMBL
C5XFQ3
View PI in InterPro
IPR003465
View protein in Pfam
PF02428
CM000762
REFERENCES
PubMed ID:
19189423
|
Application:
REACTIVE LOOPS
Entry
RCL Sequence
Target Protease
Position
RL-33
CPQYC
Unknown
32 - 36
GO TERMS
Molecular Function
Cellular Component
Biological Process
serine-type endopeptidase inhibitor activity (GO:0004867)
None
None
SPATIO TEMPORAL DISTRIBUTION
Tissue Distribution
Induction
Elicitor Molecules
Target Insect
Remarks
Reference
No Records Found
BIO-CHEMICAL PROPERTIES
Ki (uM)
IC50 (uM)
Target Protease
Cross Reactivity
Remarks
Reference
No Records Found
BIO-PHYSICAL PROPERTIES
Affinity
Binding Energy
Stability
Remarks
Reference
No Records Found
DOMAIN STRUCTURE FOLD
Beta Sheet Numbers
Alpha Helix Numbers
Coil Numbers
Disulphide Bonds Numbers
Remarks
Reference
No Records Found
Entry
Domain Position
RCL
RCL Position
Linker
Linker Position
Domain Type
IRD-396
29 - 77
CPQYC
31 - 35
-
H+L Type (Type-III)
Domain(
IRD-396
)
:
VA
CPQYC
LEVDYVTCPSSGSEKLPARCNCCLAPKGCTLHLSDGTQQTCS
Reactive Loop(RCL)
:
CPQYC
Linker
:
Domain Type
:
H+L Type (Type-III)
Disulphide Bond
:
3,27 ; 7,15 ; 29,48 ; 30,36
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
V
A
C
P
Q
Y
C
L
E
V
D
Y
V
T
C
P
S
S
G
S
E
K
L
P
A
R
C
N
C
C
L
A
P
K
G
C
T
L
H
L
S
D
G
T
Q
Q
T
C
S
DOMAINS ARCHITECTURE
Domain
Position
Length
Architecture
IRD-396
29 - 77
49
Amino Acid
Count
% by Frequency
Alanine
7
9.09
Cysteine
9
11.69
Aspartic acid
2
2.6
Glutamic acid
3
3.9
Phenylalanine
1
1.3
Glycine
7
9.09
Histidine
1
1.3
Isoleucine
2
2.6
Lysine
2
2.6
Leucine
10
12.99
Methionine
1
1.3
Asparagine
1
1.3
Proline
4
5.19
Glutamine
5
6.49
Arginine
2
2.6
Serine
6
7.79
Threonine
5
6.49
Valine
6
7.79
Tryptophan
0
0
Tyrosine
3
3.9
Architecture
×
Signal Peptide
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
M
A
A
S
R
F
Y
V
T
C
A
L
L
L
I
G
V
V
L
L
G
Q
Q
G
I
E
G
A
V
A
C
P
Q
Y
C
L
E
V
D
Y
V
T
C
P
S
S
G
S
E
K
L
P
A
R
C
N
C
C
L
A
P
K
G
C
T
L
H
L
S
D
G
T
Q
Q
T
C
S
A
A
S
R
F
Y
V
T
C
A
L
L
L
I
G
V
V
L
L
G
Q
Q
G
I
E
G
A
Domains
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
M
A
A
S
R
F
Y
V
T
C
A
L
L
L
I
G
V
V
L
L
G
Q
Q
G
I
E
G
A
V
A
C
P
Q
Y
C
L
E
V
D
Y
V
T
C
P
S
S
G
S
E
K
L
P
A
R
C
N
C
C
L
A
P
K
G
C
T
L
H
L
S
D
G
T
Q
Q
T
C
S
